HSCBB11 WORKSHOP “ADVANCED BIOINFORMATICS TOOLS & APPLICATIONS”
Material, further information and list of participants can be found here. For the login details, a relevant e-mail has been sent to all the HSCBB members. For questions or further details please contact Dr. Maria Klapa.
Thursday 6/10/2011 (afternoon)14:00-14:15 (N. Moschonas, A.Tsakalidis, M. Klapa) Opening Remarks – Scope of the Workshop
14:15-14:35 Lecture 1A (N. Moschonas) Reconstruction of Protein-Protein Interaction Networks: Significance & Challenges
14:35-15:00 Lecture 1B (M. Klapa) Literature-Curated Human Protein-Protein Interaction Databases: Characteristics & Limitations
15:00-15:30 Lecture 1C (T. Sarafidou) Case-Study: The FRA10AC1-spliceosome protein interaction network
15:30-17:00 Lecture 1D (E. Theodoridis) Tools for Biological Database Management: Focus on Protein-Protein Interactions
17:00-17:30 COFFEE BREAK
17:30-18:30 Lecture 2 (G. Pavlopoulos) Visualization of Biological Networks and Concepts
18:30- 20:00 Lecture 3 (C.Ouzounis, V. Promponas) Biological Sequence Analysis : Tools for Comparative Genomics
20.00-21.00 Discussion (L. Alexopoulos, A.Armaou, S. Bicciato, C. Ouzounis moderator: M. Klapa) Integrating Disciplines and Research Approaches in Computational Systems Biology
21.30 - DINNER
Friday 7/10/2011 (morning) 09.00-11:30 Lecture 4 (S. Bicciato) Transcriptomic Data Normalization & Analysis Integration of Genomic and Transcriptomic Data 11:30 – 12:00 COFFEE BREAK 12:00-13:45 Lecture 5 (M. Klapa) Metabolic Network Analysis Integrating Transcriptomics & Metabolomics 13:45-14:00 CLOSING REMARKS
Affiliations of Workshop Speakers:
Note 1:
The workshop will take place in the
computer room of the Department of Computer Engineering and Informatics,
University of Patras and most lectures will involve web search and hands-on
exercises
Note 2: Lectures will be in English
Note 3: The venue of the workshop is the computer room of the Dept. of Computer Engineering and Informatics, University of Patras. View Computer Engineering & Informatics Dept. in a larger map
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